LINC01099

Across TCGA patient cohorts, LINC01099 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,540 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01099-associated GO terms across cancer lineages are Establishment of protein localization to membrane, Protein localization to nuclear body, and Protein localization to nucleoplasm. Each is linked with LINC01099 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC01099-to-partner and partner-to-LINC01099 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Establishment of protein localization to membrane grouped by LINC01099-low versus LINC01099-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01099→partner) and Y-score (partner→LINC01099) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Establishment of protein localization to membrane →	+0.053	+0.135	<.001	<.001	3	14
STAD	Protein localization to nuclear body →	+0.054	+0.049	<.001	<.001	3	14
STAD	Protein localization to nucleoplasm →	+0.055	+0.052	<.001	<.001	3	12
STAD	Positive regulation of neurogenesis →	+0.045	+0.091	<.001	<.001	3	12
STAD	Reticulophagy →	+0.056	+0.071	<.001	<.001	3	12
STAD	Membrane lipid metabolic process →	+0.034	+0.056	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,540 associations by consensus.

Establishment of protein localization to membrane by LINC01099 expression — ESCA

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