LINC01093

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01093 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,383 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01093-associated proteins across cancer lineages are MMP8, MMP9, and MNDA. Each is linked with LINC01093 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC01093-to-partner and partner-to-LINC01093 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01093 versus MMP8 in GBM, with a Pearson correlation of 0.57.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01093→partner) and Y-score (partner→LINC01093) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMMMP8 →+1.340+0.136<.001<.00135
GBMMMP9 →+1.111+0.132<.001<.00135
GBMMNDA →+0.983+0.146<.001<.00135
GBMMPO →+1.161+0.135<.001<.00135
GBMNCF1 →+0.791+0.134<.001<.00135
GBMNCF2 →+0.795+0.149<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,383 associations by consensus.

LINC01093 vs MMP8 — GBM

Per-sample scatter of LINC01093 vs MMP8 in GBM (Pearson r = 0.57).

Explore this scatter interactively →

Exploration