LINC01065

Across TCGA patient cohorts, LINC01065 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,793 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01065-associated GO terms across cancer lineages are Regulation of DNA repair, Facultative heterochromatin formation, and Positive regulation of DNA metabolic process. Each is linked with LINC01065 in more than 10 cancer types. Because this analysis shows association rather than direction, both LINC01065-to-partner and partner-to-LINC01065 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of DNA repair grouped by LINC01065-low versus LINC01065-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01065→partner) and Y-score (partner→LINC01065) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Regulation of DNA repair →	+0.114	+0.054	<.001	.001	3	11
ESCA	Facultative heterochromatin formation →	+0.105	+0.086	<.001	.003	3	10
ESCA	Positive regulation of DNA metabolic process →	+0.116	+0.052	<.001	.002	3	10
ESCA	Regulation of DNA recombination →	+0.104	+0.073	<.001	.002	3	9
ESCA	Hematopoietic progenitor cell differentiation →	+0.087	+0.056	<.001	.001	3	9
ESCA	Midbrain development →	+0.119	+0.053	<.001	.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,793 associations by consensus.

Regulation of DNA repair by LINC01065 expression — ESCA

Explore this box plot interactively →