LINC01048

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01048 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,358 significant associations in total. COAD shows the largest number of these associations.

The most reproducible LINC01048-associated proteins across cancer lineages are FAP, POSTN, and SERPINH1. Each is linked with LINC01048 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC01048-to-partner and partner-to-LINC01048 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01048 versus FAP in OV, with a Pearson correlation of 0.37.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01048→partner) and Y-score (partner→LINC01048) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVFAP →+0.818+0.374<.001.00138
HNSCPOSTN →+1.180+0.650<.001<.00138
PDACSERPINH1 →+0.452+0.544<.001<.00138
GBMP3H3 →+0.571+0.281<.001.00738
BRCACOL3A1 →+0.662+0.716<.001<.00137
HNSCVCAN →+0.922+0.590<.001<.00137
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,358 associations by consensus.

LINC01048 vs FAP — OV

Per-sample scatter of LINC01048 vs FAP in OV (Pearson r = 0.37).

Explore this scatter interactively →

Exploration