LINC01047

Across TCGA patient cohorts, LINC01047 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,420 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01047-associated GO terms across cancer lineages are Internal protein amino acid acetylation, rRNA modification, and Mitochondrial respiratory chain complex assembly. Each is linked with LINC01047 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01047-to-partner and partner-to-LINC01047 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Internal protein amino acid acetylation grouped by LINC01047-low versus LINC01047-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01047→partner) and Y-score (partner→LINC01047) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Internal protein amino acid acetylation →	+0.081	+0.121	<.001	<.001	3	10
STAD	rRNA modification →	+0.082	+0.140	<.001	<.001	3	10
STAD	Mitochondrial respiratory chain complex assembly →	+0.098	+0.145	<.001	<.001	3	10
STAD	Protein stabilization →	+0.090	+0.121	<.001	<.001	3	10
STAD	Transcription initiation at RNA polymerase II promoter →	+0.090	+0.148	<.001	<.001	3	10
STAD	tRNA metabolic process →	+0.088	+0.133	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,420 associations by consensus.

Internal protein amino acid acetylation by LINC01047 expression — STAD

Explore this box plot interactively →