LINC01039

Across TCGA patient cohorts, LINC01039 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,194 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01039-associated GO terms across cancer lineages are Mitochondrial transport, Regulation of microtubule-based process, and Obsolete ncRNA transcription. Each is linked with LINC01039 in more than 12 cancer types. Because this analysis shows association rather than direction, both LINC01039-to-partner and partner-to-LINC01039 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Mitochondrial transport grouped by LINC01039-low versus LINC01039-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01039→partner) and Y-score (partner→LINC01039) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Mitochondrial transport →	+0.090	+0.122	<.001	<.001	3	13
STAD	Regulation of microtubule-based process →	+0.065	+0.120	<.001	<.001	3	13
STAD	Obsolete ncRNA transcription →	+0.085	+0.117	<.001	<.001	3	12
STAD	Positive regulation of post-translational protein modification →	+0.084	+0.117	<.001	<.001	3	12
STAD	Positive regulation of proteolysis involved in protein catabolic process →	+0.085	+0.121	<.001	<.001	3	12
STAD	Regulation of protein serine/threonine kinase activity →	+0.072	+0.115	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,194 associations by consensus.

Mitochondrial transport by LINC01039 expression — STAD

Explore this box plot interactively →