LINC01030

Across TCGA patient cohorts, LINC01030 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,800 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01030-associated GO terms across cancer lineages are Protein-RNA complex organization, NADH dehydrogenase complex assembly, and Regulation of chromosome organization. Each is linked with LINC01030 in more than 16 cancer types. Because this analysis shows association rather than direction, both LINC01030-to-partner and partner-to-LINC01030 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein-RNA complex organization grouped by LINC01030-low versus LINC01030-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01030→partner) and Y-score (partner→LINC01030) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Protein-RNA complex organization →	+0.070	+0.201	<.001	<.001	3	17
STAD	NADH dehydrogenase complex assembly →	+0.067	+0.200	<.001	<.001	3	16
ESCA	Regulation of chromosome organization →	+0.071	+0.190	<.001	.002	3	16
STAD	Ribosomal large subunit biogenesis →	+0.076	+0.190	<.001	<.001	3	16
STAD	Positive regulation of DNA repair →	+0.059	+0.210	<.001	<.001	3	16
STAD	RNA methylation →	+0.061	+0.186	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,800 associations by consensus.

Protein-RNA complex organization by LINC01030 expression — ESCA

Explore this box plot interactively →