LINC01029

Across TCGA patient cohorts, LINC01029 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,762 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC01029-associated GO terms across cancer lineages are Nucleobase-containing compound transport, Amino acid activation, and tRNA metabolic process. Each is linked with LINC01029 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC01029-to-partner and partner-to-LINC01029 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Nucleobase-containing compound transport grouped by LINC01029-low versus LINC01029-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01029→partner) and Y-score (partner→LINC01029) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Nucleobase-containing compound transport →	+0.095	+0.247	<.001	<.001	3	10
STAD	Amino acid activation →	+0.090	+0.149	<.001	<.001	3	10
STAD	tRNA metabolic process →	+0.092	+0.146	<.001	<.001	3	10
STAD	Nucleoside triphosphate metabolic process →	+0.099	+0.149	<.001	<.001	3	10
STAD	RNA methylation →	+0.082	+0.142	<.001	<.001	3	9
STAD	rRNA metabolic process →	+0.100	+0.137	<.001	.001	2	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,762 associations by consensus.

Nucleobase-containing compound transport by LINC01029 expression — STAD

Explore this box plot interactively →