LINC01017

Across TCGA patient cohorts, LINC01017 RNA expression is significantly associated with the RNA expression of many other genes, with 6,415 significant associations in total. COAD shows the largest number of these associations.

The most reproducible LINC01017-associated genes across cancer lineages are CT47B1, VN2R3P, and LINC02750. Each is linked with LINC01017 in more than 16 cancer types. Because this analysis shows association rather than direction, both LINC01017-to-partner and partner-to-LINC01017 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01017 versus CT47B1 in KIRP, with a Pearson correlation of 0.46.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01017→partner) and Y-score (partner→LINC01017) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIRP	CT47B1 →	+1.087	+0.141	<.001	<.001	3	17
COAD	VN2R3P →	+0.589	+0.058	<.001	<.001	3	17
KICH	LINC02750 →	+1.089	+0.058	<.001	<.001	3	15
KICH	MS4A13 →	+1.039	+0.118	<.001	<.001	3	15
KICH	SIAH1P1 →	+0.986	+0.058	<.001	<.001	3	15
SKCM	CTBP2P1 →	+0.998	+0.022	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,415 associations by consensus.

LINC01017 vs CT47B1 — KIRP

Explore this scatter interactively →