LINC01004

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC01004 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,930 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC01004-associated proteins across cancer lineages are MEPCE, KMT2E_S1444, and RSBN1L. Each is linked with LINC01004 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC01004-to-partner and partner-to-LINC01004 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01004→partner) and Y-score (partner→LINC01004) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMEPCE →+0.362+0.500<.001<.00137
LUADKMT2E_S1444 →+0.347+0.495.001<.00135
HNSCRSBN1L →+0.336+0.715<.001.00235
LSCCGTF2I →+0.412+0.529<.001<.00135
HNSCGTF3C2 →+0.232+0.718<.001.00135
LSCCORC5 →+0.368+0.549.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,930 associations by consensus.

Exploration