LINC01003

Across TCGA patient cohorts, LINC01003 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,887 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC01003-associated proteins across cancer lineages are ZKSCAN1, MEPCE, and REPIN1. Each is linked with LINC01003 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC01003-to-partner and partner-to-LINC01003 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC01003 versus ZKSCAN1 in HNSC, with a Pearson correlation of 0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01003→partner) and Y-score (partner→LINC01003) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	ZKSCAN1 →	+0.370	+0.495	<.001	.007	3	6
LSCC	MEPCE →	+0.347	+0.534	<.001	<.001	3	5
HNSC	REPIN1 →	+0.385	+0.487	<.001	.001	3	5
COAD	SSBP1 →	+0.499	+0.573	.002	<.001	3	5
HNSC	STRBP →	+0.607	+0.587	<.001	.001	3	5
GBM	CYBB →	-0.578	-0.616	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,887 associations by consensus.

LINC01003 vs ZKSCAN1 — HNSC

Explore this scatter interactively →