LINC01001

Across TCGA patient cohorts, LINC01001 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,154 significant associations in total. KIRC shows the largest number of these associations.

The most reproducible LINC01001-associated GO terms across cancer lineages are Endosomal transport, Cytosolic transport, and Positive regulation of protein-containing complex assembly. Each is linked with LINC01001 in more than 31 cancer types. Because this analysis shows association rather than direction, both LINC01001-to-partner and partner-to-LINC01001 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Endosomal transport grouped by LINC01001-low versus LINC01001-high in DLBC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC01001→partner) and Y-score (partner→LINC01001) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
DLBC	Endosomal transport →	+0.059	+0.663	.003	<.001	3	32
DLBC	Cytosolic transport →	+0.054	+0.663	<.001	<.001	3	32
THYM	Positive regulation of protein-containing complex assembly →	+0.045	+0.553	<.001	<.001	3	32
DLBC	TOR signaling →	+0.048	+0.504	<.001	<.001	3	32
THYM	Peptidyl-serine autophosphorylation →	+0.084	+0.526	<.001	<.001	3	32
DLBC	TORC1 signaling →	+0.053	+0.589	<.001	<.001	3	32

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,154 associations by consensus.

Endosomal transport by LINC01001 expression — DLBC

Explore this box plot interactively →