LINC00996

Across TCGA patient cohorts, LINC00996 RNA expression is significantly associated with the protein abundance of many other proteins, with 16,159 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC00996-associated proteins across cancer lineages are FYB1, IL16, and LCP2. Each is linked with LINC00996 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC00996-to-partner and partner-to-LINC00996 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00996 versus FYB1 in GBM, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00996→partner) and Y-score (partner→LINC00996) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	FYB1 →	+0.889	+0.408	<.001	<.001	3	10
HNSC	IL16 →	+0.639	+0.788	<.001	<.001	3	10
HNSC	LCP2 →	+0.575	+0.898	<.001	<.001	3	10
GBM	LPXN →	+0.541	+0.296	<.001	<.001	3	10
GBM	ARHGAP15 →	+0.844	+0.382	<.001	<.001	3	10
GBM	HCLS1 →	+0.800	+0.335	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,159 associations by consensus.

LINC00996 vs FYB1 — GBM

Explore this scatter interactively →