LINC00957

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00957 mutation is significantly associated with the RNA expression of many other genes, with 5 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00957-associated genes across cancer lineages are MIR4795, IGHD1-1, and RN7SL567P. Each is linked with LINC00957 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00957-to-partner and partner-to-LINC00957 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR4795 grouped by LINC00957-low versus LINC00957-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00957→partner) and Y-score (partner→LINC00957) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMIR4795 →+0.710+5.031<.001.00931
UCECIGHD1-1 →+1.564+6.335<.001.00131
UCECRN7SL567P →+0.186+5.242.007.00731
UCECDCANP1 →+0.027+5.551<.001.00431
UCECCYP4F44P →+0.217+5.771.001.00331
Each partner links to its Q-omics profile. Showing the 5 strongest of 5 associations by consensus.

MIR4795 by LINC00957 expression — UCEC

Box plot of MIR4795 in LINC00957-low vs LINC00957-high samples in UCEC.

Explore this box plot interactively →

Exploration