Across TCGA patient cohorts, LINC00954 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,083 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC00954-associated proteins across cancer lineages are TRPM4, RALY, and RALY_S135. Each is linked with LINC00954 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00954-to-partner and partner-to-LINC00954 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00954→partner) and Y-score (partner→LINC00954) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	TRPM4 →	-0.562	-0.631	.009	.002	3	5
COAD	RALY →	+0.240	+0.407	.001	.001	3	4
HNSC	RALY_S135 →	+0.259	+0.592	<.001	.002	3	4
LSCC	RPL26 →	-0.564	-0.667	<.001	<.001	3	4
LSCC	SMARCC2 →	+0.310	+0.733	<.001	<.001	3	4
LSCC	CEP170B →	-0.313	-0.546	<.001	.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,083 associations by consensus.

Exploration

LINC00954 survival (RNA) · tumor vs normal (RNA) · all LINC00954 data types