Across TCGA patient cohorts, LINC00943 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,103 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible LINC00943-associated proteins across cancer lineages are PTPN6, APOL3, and ARHGAP25. Each is linked with LINC00943 in more than 8 cancer types. Because this analysis shows association rather than direction, both LINC00943-to-partner and partner-to-LINC00943 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00943→partner) and Y-score (partner→LINC00943) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	PTPN6 →	+0.402	+0.317	<.001	<.001	3	9
BRCA	APOL3 →	+0.737	+0.195	<.001	<.001	3	8
BRCA	ARHGAP25 →	+0.736	+0.220	<.001	<.001	3	8
LSCC	PSMB10 →	+0.591	+0.450	<.001	<.001	3	8
UCEC	CORO1A →	+0.812	+0.545	<.001	<.001	3	8
LSCC	FYB1 →	+0.657	+0.320	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,103 associations by consensus.

Exploration

LINC00943 survival (RNA) · tumor vs normal (RNA) · all LINC00943 data types