LINC00940

Across TCGA patient cohorts, LINC00940 mutation is significantly associated with the RNA expression of many other genes, with 31 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00940-associated genes across cancer lineages are RNA5SP148, RNU6-1120P, and RN7SKP280. Each is linked with LINC00940 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00940-to-partner and partner-to-LINC00940 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP148 grouped by LINC00940-low versus LINC00940-high in BRCA.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00940→partner) and Y-score (partner→LINC00940) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	RNA5SP148 →	+0.790	+7.731	<.001	.009	3	1
BRCA	RNU6-1120P →	+0.211	+8.055	<.001	.007	3	1
UCEC	RN7SKP280 →	+0.557	+5.003	<.001	.002	3	1
UCEC	RNY1P1 →	+0.627	+5.335	<.001	.003	3	1
UCEC	RNU1-93P →	+0.463	+4.771	<.001	.006	3	1
UCEC	RNY4P34 →	+1.420	+4.279	<.001	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 31 associations by consensus.

RNA5SP148 by LINC00940 expression — BRCA

Explore this box plot interactively →