LINC00928

Across TCGA patient cohorts, LINC00928 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,483 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00928-associated proteins across cancer lineages are NSMCE3, TTC12, and ZFYVE16. Each is linked with LINC00928 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC00928-to-partner and partner-to-LINC00928 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00928 versus NSMCE3 in GBM, with a Pearson correlation of 0.31.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00928→partner) and Y-score (partner→LINC00928) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	NSMCE3 →	+0.243	+0.990	.005	<.001	3	4
GBM	TTC12 →	-0.440	-1.000	<.001	<.001	3	4
HNSC	ZFYVE16 →	-0.210	-0.420	<.001	<.001	3	3
GBM	ZNF219_S114 →	+0.802	+1.103	<.001	<.001	3	3
LSCC	ORC3 →	+0.416	+0.383	<.001	<.001	3	3
LSCC	PHC3 →	+0.389	+0.468	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,483 associations by consensus.

LINC00928 vs NSMCE3 — GBM

Explore this scatter interactively →