LINC00909

Across TCGA patient cohorts, LINC00909 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,462 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00909-associated proteins across cancer lineages are SMAD4, SMAD2, and CTDP1. Each is linked with LINC00909 in more than 6 cancer types. Because this analysis shows association rather than direction, both LINC00909-to-partner and partner-to-LINC00909 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00909 versus SMAD4 in PDAC, with a Pearson correlation of 0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00909→partner) and Y-score (partner→LINC00909) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PDAC	SMAD4 →	+0.317	+0.315	<.001	<.001	3	7
HNSC	SMAD2 →	+0.351	+0.620	<.001	.001	3	6
COAD	CTDP1 →	+0.292	+0.563	<.001	<.001	3	6
GBM	PSIP1 →	+0.636	+0.309	<.001	.004	3	5
GBM	RPS8 →	-0.376	-0.442	.001	<.001	3	5
COAD	ZNF24 →	+0.386	+0.457	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,462 associations by consensus.

LINC00909 vs SMAD4 — PDAC

Explore this scatter interactively →