LINC00909

Across TCGA patient cohorts, LINC00909 mutation is significantly associated with the RNA expression of many other genes, with 49 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00909-associated genes across cancer lineages are MIR4672, MIR5188, and RN7SL140P. Each is linked with LINC00909 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00909-to-partner and partner-to-LINC00909 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR4672 grouped by LINC00909-low versus LINC00909-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00909→partner) and Y-score (partner→LINC00909) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	MIR4672 →	+0.741	+3.363	<.001	.001	3	1
UCEC	MIR5188 →	+0.846	+3.235	<.001	.003	3	1
UCEC	RN7SL140P →	+0.122	+3.997	.009	.009	3	1
UCEC	H3Y1 →	+1.453	+3.000	<.001	.006	3	1
UCEC	URGCP-MRPS24 →	+0.359	+3.421	<.001	.009	3	1
UCEC	RNA5SP414 →	+0.914	+3.992	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 49 associations by consensus.

MIR4672 by LINC00909 expression — UCEC

Explore this box plot interactively →