LINC00904

Across TCGA patient cohorts, LINC00904 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,471 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00904-associated GO terms across cancer lineages are Protein methylation, Positive regulation of DNA metabolic process, and mRNA 3'-end processing. Each is linked with LINC00904 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC00904-to-partner and partner-to-LINC00904 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein methylation grouped by LINC00904-low versus LINC00904-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00904→partner) and Y-score (partner→LINC00904) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Protein methylation →	+0.072	+0.126	<.001	<.001	3	14
STAD	Positive regulation of DNA metabolic process →	+0.078	+0.153	<.001	<.001	3	14
STAD	mRNA 3'-end processing →	+0.081	+0.136	<.001	<.001	3	14
STAD	Positive regulation of translation →	+0.081	+0.128	<.001	<.001	3	14
STAD	Nuclear-transcribed mRNA catabolic process →	+0.086	+0.132	<.001	<.001	3	14
STAD	RNA modification →	+0.074	+0.136	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,471 associations by consensus.

Protein methylation by LINC00904 expression — STAD

Explore this box plot interactively →