Across TCGA patient cohorts, LINC00898 mutation is significantly associated with the RNA expression of many other genes, with 42 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00898-associated genes across cancer lineages are IGKV1OR-2, IGHV3OR16-6, and IGKV1OR2-118. Each is linked with LINC00898 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00898-to-partner and partner-to-LINC00898 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00898→partner) and Y-score (partner→LINC00898) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	IGKV1OR-2 →	+0.260	+3.715	.004	.001	3	1
UCEC	IGHV3OR16-6 →	+0.619	+3.580	.009	.006	3	1
UCEC	IGKV1OR2-118 →	+0.349	+3.818	<.001	.001	3	1
UCEC	IGHV3OR16-13 →	+0.796	+3.896	.007	.002	3	1
UCEC	IGHV1OR15-3 →	+0.161	+4.092	.001	<.001	3	1
UCEC	MIR6859-2 →	+1.110	+4.427	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 42 associations by consensus.

Exploration

LINC00898 survival (RNA) · tumor vs normal (RNA) · all LINC00898 data types