LINC00896

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00896 mutation is significantly associated with the immune_cell of many other genes, with 1 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00896-associated genes across cancer lineages are CD4+ Tem. Each is linked with LINC00896 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00896-to-partner and partner-to-LINC00896 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CD4+ Tem grouped by LINC00896-low versus LINC00896-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00896→partner) and Y-score (partner→LINC00896) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCD4+ Tem →+0.071+5.081<.001.00831
Each partner links to its Q-omics profile. Showing the 1 strongest of 1 associations by consensus.

CD4+ Tem by LINC00896 expression — UCEC

Box plot of CD4+ Tem in LINC00896-low vs LINC00896-high samples in UCEC.

Explore this box plot interactively →

Exploration