LINC00838

Across TCGA patient cohorts, LINC00838 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,726 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00838-associated GO terms across cancer lineages are Maintenance of location in cell, Positive regulation of post-translational protein modification, and Positive regulation of cysteine-type endopeptidase activity. Each is linked with LINC00838 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC00838-to-partner and partner-to-LINC00838 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Maintenance of location in cell grouped by LINC00838-low versus LINC00838-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00838→partner) and Y-score (partner→LINC00838) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Maintenance of location in cell →	+0.062	+0.092	<.001	<.001	3	10
STAD	Positive regulation of post-translational protein modification →	+0.082	+0.084	<.001	<.001	3	10
ESCA	Positive regulation of cysteine-type endopeptidase activity →	+0.083	+0.119	<.001	.002	3	10
STAD	Positive regulation of DNA metabolic process →	+0.077	+0.086	<.001	<.001	3	10
ESCA	Regulation of DNA repair →	+0.091	+0.123	<.001	<.001	3	10
STAD	Regulation of protein serine/threonine kinase activity →	+0.068	+0.084	<.001	<.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,726 associations by consensus.

Maintenance of location in cell by LINC00838 expression — STAD

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