LINC00824

Across TCGA patient cohorts, LINC00824 RNA expression is significantly associated with the RNA expression of many other genes, with 7,391 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC00824-associated genes across cancer lineages are NIBAN3, LAT, and TTC39C-AS1. Each is linked with LINC00824 in more than 14 cancer types. Because this analysis shows association rather than direction, both LINC00824-to-partner and partner-to-LINC00824 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00824 versus NIBAN3 in SKCM, with a Pearson correlation of 0.07.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00824→partner) and Y-score (partner→LINC00824) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	NIBAN3 →	+1.134	+0.056	<.001	<.001	2	15
THYM	LAT →	+1.345	+0.108	<.001	<.001	3	13
UCS	TTC39C-AS1 →	+0.730	+0.087	<.001	.005	3	12
SKCM	LY9 →	+0.786	+0.059	<.001	.005	2	13
TGCT	CNR2 →	+1.540	+0.377	<.001	<.001	3	12
CHOL	LINC02812 →	+0.748	+0.095	.001	.002	2	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,391 associations by consensus.

LINC00824 vs NIBAN3 — SKCM

Explore this scatter interactively →