LINC00709

Across TCGA patient cohorts, LINC00709 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,287 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00709-associated GO terms across cancer lineages are Quinone metabolic process, Regulation of generation of precursor metabolites and energy, and Cellular lipid catabolic process. Each is linked with LINC00709 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00709-to-partner and partner-to-LINC00709 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Quinone metabolic process grouped by LINC00709-low versus LINC00709-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00709→partner) and Y-score (partner→LINC00709) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Quinone metabolic process →	+0.105	+0.079	<.001	<.001	3	5
ESCA	Regulation of generation of precursor metabolites and energy →	+0.127	+0.051	<.001	.007	3	5
STAD	Cellular lipid catabolic process →	+0.093	+0.076	<.001	<.001	3	5
STAD	Neutral lipid biosynthetic process →	+0.083	+0.074	<.001	<.001	3	5
ESCA	Vesicle coating →	+0.126	+0.056	<.001	.002	3	5
STAD	Fatty acid catabolic process →	+0.103	+0.075	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,287 associations by consensus.

Quinone metabolic process by LINC00709 expression — STAD

Explore this box plot interactively →