LINC00706

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00706 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,381 significant associations in total. GBM shows the largest number of these associations.

The most reproducible LINC00706-associated proteins across cancer lineages are PLCG2, GPSM3, and MYO1G. Each is linked with LINC00706 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC00706-to-partner and partner-to-LINC00706 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00706 versus PLCG2 in BRCA, with a Pearson correlation of 0.18.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00706→partner) and Y-score (partner→LINC00706) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAPLCG2 →+0.612+0.184<.001.00334
LSCCGPSM3 →+0.391+0.299<.001.00334
LSCCMYO1G →+0.393+0.327<.001<.00134
GBMBASP1 →+0.681+0.538<.001<.00134
LSCCBASP1_T36 →+0.501+0.317<.001<.00134
HNSCWIPF1 →+0.309+0.410<.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,381 associations by consensus.

LINC00706 vs PLCG2 — BRCA

Per-sample scatter of LINC00706 vs PLCG2 in BRCA (Pearson r = 0.18).

Explore this scatter interactively →

Exploration