LINC00656

Across TCGA patient cohorts, LINC00656 RNA expression is significantly associated with the RNA expression of many other genes, with 10,943 significant associations in total. THYM shows the largest number of these associations.

The most reproducible LINC00656-associated genes across cancer lineages are THBD, FCGR2A, and NCF2. Each is linked with LINC00656 in more than 23 cancer types. Because this analysis shows association rather than direction, both LINC00656-to-partner and partner-to-LINC00656 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00656 versus THBD in ESCA, with a Pearson correlation of 0.57.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00656→partner) and Y-score (partner→LINC00656) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	THBD →	+2.018	+0.184	<.001	<.001	3	23
LAML	FCGR2A →	+1.868	+0.340	<.001	<.001	3	22
LAML	NCF2 →	+1.777	+0.258	<.001	<.001	1	24
ESCA	TGFB1 →	+1.232	+0.131	<.001	<.001	3	21
SARC	RASGRP4 →	+1.074	+0.192	<.001	<.001	2	22
LAML	MEFV →	+1.750	+0.188	<.001	.005	2	22

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,943 associations by consensus.

LINC00656 vs THBD — ESCA

Explore this scatter interactively →