LINC00654

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00654 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,058 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible LINC00654-associated proteins across cancer lineages are RBBP9, MYEF2, and MYEF2_S17. Each is linked with LINC00654 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00654-to-partner and partner-to-LINC00654 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00654→partner) and Y-score (partner→LINC00654) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRBBP9 →+0.367+0.715<.001<.00135
HNSCMYEF2 →+0.694+0.549<.001<.00135
HNSCMYEF2_S17 →+1.202+0.666<.001<.00135
LSCCSLC1A5 →-0.642-0.659<.001<.00134
HNSCEPHA2 →-0.761-0.579<.001<.00134
HNSCFERMT2 →+0.676+0.707<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,058 associations by consensus.

Exploration