LINC00604

Across TCGA patient cohorts, LINC00604 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,964 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00604-associated GO terms across cancer lineages are Apoptotic mitochondrial changes, Reactive oxygen species metabolic process, and Activation of GTPase activity. Each is linked with LINC00604 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00604-to-partner and partner-to-LINC00604 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Apoptotic mitochondrial changes grouped by LINC00604-low versus LINC00604-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00604→partner) and Y-score (partner→LINC00604) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Apoptotic mitochondrial changes →	+0.113	+0.073	<.001	<.001	3	5
STAD	Reactive oxygen species metabolic process →	+0.089	+0.062	<.001	<.001	3	4
STAD	Activation of GTPase activity →	+0.079	+0.048	<.001	<.001	3	4
STAD	Extrinsic apoptotic signaling pathway →	+0.103	+0.054	<.001	<.001	3	4
STAD	Nucleoside triphosphate catabolic process →	+0.071	+0.057	<.001	<.001	3	4
STAD	Regulation of cell-matrix adhesion →	+0.099	+0.051	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,964 associations by consensus.

Apoptotic mitochondrial changes by LINC00604 expression — STAD

Explore this box plot interactively →