LINC00596

Across TCGA patient cohorts, LINC00596 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,517 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00596-associated GO terms across cancer lineages are tRNA metabolic process, Protein polyubiquitination, and Telomere organization. Each is linked with LINC00596 in more than 17 cancer types. Because this analysis shows association rather than direction, both LINC00596-to-partner and partner-to-LINC00596 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, tRNA metabolic process grouped by LINC00596-low versus LINC00596-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00596→partner) and Y-score (partner→LINC00596) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	tRNA metabolic process →	+0.060	+0.088	<.001	.001	3	18
ESCA	Protein polyubiquitination →	+0.072	+0.093	<.001	<.001	3	17
STAD	Telomere organization →	+0.046	+0.070	<.001	<.001	3	17
ESCA	Obsolete histone modification →	+0.072	+0.123	<.001	<.001	3	16
STAD	TORC1 signaling →	+0.055	+0.079	<.001	<.001	3	16
ESCA	Vesicle localization →	+0.064	+0.132	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,517 associations by consensus.

tRNA metabolic process by LINC00596 expression — ESCA

Explore this box plot interactively →