LINC00560

Across TCGA patient cohorts, LINC00560 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,410 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00560-associated GO terms across cancer lineages are Positive regulation of proteasomal protein catabolic process, Positive regulation of cell cycle G1/S phase transition, and Negative regulation of cellular catabolic process. Each is linked with LINC00560 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC00560-to-partner and partner-to-LINC00560 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of proteasomal protein catabolic process grouped by LINC00560-low versus LINC00560-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00560→partner) and Y-score (partner→LINC00560) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of proteasomal protein catabolic process →	+0.100	+0.083	<.001	<.001	3	8
STAD	Positive regulation of cell cycle G1/S phase transition →	+0.073	+0.075	<.001	<.001	3	8
STAD	Negative regulation of cellular catabolic process →	+0.088	+0.090	<.001	<.001	3	8
STAD	RNA polymerase II preinitiation complex assembly →	+0.104	+0.100	<.001	<.001	3	8
STAD	Transcription preinitiation complex assembly →	+0.106	+0.089	<.001	<.001	3	8
STAD	Regulation of protein serine/threonine kinase activity →	+0.084	+0.082	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,410 associations by consensus.

Positive regulation of proteasomal protein catabolic process by LINC00560 expression — STAD

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