LINC00552

Across TCGA patient cohorts, LINC00552 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,930 significant associations in total. LGG shows the largest number of these associations.

The most reproducible LINC00552-associated GO terms across cancer lineages are Cytoskeleton-dependent intracellular transport, Transport along microtubule, and Obsolete histone modification. Each is linked with LINC00552 in more than 16 cancer types. Because this analysis shows association rather than direction, both LINC00552-to-partner and partner-to-LINC00552 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Cytoskeleton-dependent intracellular transport grouped by LINC00552-low versus LINC00552-high in GBM.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00552→partner) and Y-score (partner→LINC00552) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	Cytoskeleton-dependent intracellular transport →	+0.028	+0.146	<.001	<.001	3	17
STAD	Transport along microtubule →	+0.025	+0.137	<.001	<.001	2	16
STAD	Obsolete histone modification →	+0.055	+0.245	<.001	<.001	3	15
STAD	Obsolete regulation of histone modification →	+0.052	+0.200	<.001	<.001	3	15
STAD	Protein-containing complex localization →	+0.038	+0.131	<.001	.003	2	16
STAD	Positive regulation of amide metabolic process →	+0.035	+0.185	<.001	<.001	3	15

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,930 associations by consensus.

Cytoskeleton-dependent intracellular transport by LINC00552 expression — GBM

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