LINC00551

Across TCGA patient cohorts, LINC00551 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,998 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible LINC00551-associated GO terms across cancer lineages are Positive regulation of macroautophagy, Activation of innate immune response, and Regulation of cysteine-type endopeptidase activity. Each is linked with LINC00551 in more than 17 cancer types. Because this analysis shows association rather than direction, both LINC00551-to-partner and partner-to-LINC00551 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of macroautophagy grouped by LINC00551-low versus LINC00551-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00551→partner) and Y-score (partner→LINC00551) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of macroautophagy →	+0.043	+0.065	<.001	<.001	3	17
STAD	Activation of innate immune response →	+0.040	+0.052	<.001	.002	3	17
STAD	Regulation of cysteine-type endopeptidase activity →	+0.041	+0.067	<.001	<.001	3	17
STAD	Canonical NF-kappaB signal transduction →	+0.064	+0.108	<.001	<.001	3	17
STAD	Negative regulation of response to biotic stimulus →	+0.061	+0.100	<.001	<.001	3	17
STAD	Regulation of cysteine-type endopeptidase activity involved in apoptotic process →	+0.041	+0.069	<.001	<.001	3	17

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,998 associations by consensus.

Positive regulation of macroautophagy by LINC00551 expression — STAD

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