LINC00543

Across TCGA patient cohorts, LINC00543 RNA expression is significantly associated with the go_rna of many other GO terms, with 7,041 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC00543-associated GO terms across cancer lineages are Peroxisome organization, Nucleoside triphosphate biosynthetic process, and Cellular respiration. Each is linked with LINC00543 in more than 13 cancer types. Because this analysis shows association rather than direction, both LINC00543-to-partner and partner-to-LINC00543 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Peroxisome organization grouped by LINC00543-low versus LINC00543-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00543→partner) and Y-score (partner→LINC00543) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Peroxisome organization →	+0.036	+0.762	<.001	<.001	3	14
TGCT	Nucleoside triphosphate biosynthetic process →	+0.035	+0.491	<.001	.002	3	13
GBM	Cellular respiration →	+0.023	+0.165	<.001	.007	2	14
ESCA	Organic acid catabolic process →	+0.025	+1.148	<.001	<.001	3	13
ESCA	Polyamine metabolic process →	+0.069	+1.368	<.001	<.001	3	12
ESCA	Monocarboxylic acid catabolic process →	+0.034	+0.984	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,041 associations by consensus.

Peroxisome organization by LINC00543 expression — ESCA

Explore this box plot interactively →