LINC00536

Across TCGA patient cohorts, LINC00536 RNA expression is significantly associated with the RNA expression of many other genes, with 10,191 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC00536-associated genes across cancer lineages are TRPS1, TCP11L1, and MTBP. Each is linked with LINC00536 in more than 15 cancer types. Because this analysis shows association rather than direction, both LINC00536-to-partner and partner-to-LINC00536 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00536 versus TRPS1 in ESCA, with a Pearson correlation of 0.28.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00536→partner) and Y-score (partner→LINC00536) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	TRPS1 →	+1.543	+0.295	<.001	<.001	3	16
TGCT	TCP11L1 →	+0.698	+0.184	<.001	<.001	3	14
UCEC	MTBP →	+0.548	+0.085	<.001	<.001	3	14
TGCT	TIAM2 →	+0.705	+0.148	<.001	<.001	3	14
ESCA	BAALC-AS1 →	+0.714	+0.253	<.001	<.001	3	13
TGCT	ADAMTS6 →	+0.587	+0.173	<.001	<.001	3	13

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,191 associations by consensus.

LINC00536 vs TRPS1 — ESCA

Explore this scatter interactively →