LINC00517

Across TCGA patient cohorts, LINC00517 RNA expression is significantly associated with the RNA expression of many other genes, with 10,280 significant associations in total. TGCT shows the largest number of these associations.

The most reproducible LINC00517-associated genes across cancer lineages are PLXDC1, PDGFRB, and OLFML2B. Each is linked with LINC00517 in more than 24 cancer types. Because this analysis shows association rather than direction, both LINC00517-to-partner and partner-to-LINC00517 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00517 versus PLXDC1 in PCPG, with a Pearson correlation of 0.55.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00517→partner) and Y-score (partner→LINC00517) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PCPG	PLXDC1 →	+1.037	+0.071	<.001	<.001	3	25
TGCT	PDGFRB →	+1.656	+0.107	<.001	<.001	3	24
TGCT	OLFML2B →	+1.684	+0.108	<.001	<.001	3	23
TGCT	ASPN →	+2.855	+0.109	<.001	<.001	3	22
UVM	COL4A1 →	+1.685	+0.042	<.001	<.001	3	22
TGCT	COL5A2 →	+2.224	+0.105	<.001	<.001	3	22

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,280 associations by consensus.

LINC00517 vs PLXDC1 — PCPG

Explore this scatter interactively →