Across TCGA patient cohorts, LINC00489 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,399 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00489-associated GO terms across cancer lineages are Purine nucleoside catabolic process, Positive regulation of Rho protein signal transduction, and Glycolipid transport. Each is linked with LINC00489 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC00489-to-partner and partner-to-LINC00489 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00489→partner) and Y-score (partner→LINC00489) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Purine nucleoside catabolic process →	+0.092	+0.025	<.001	<.001	3	4
STAD	Positive regulation of Rho protein signal transduction →	+0.078	+0.049	<.001	<.001	3	4
ESCA	Glycolipid transport →	+0.099	+0.023	<.001	.003	3	4
STAD	Iron-sulfur cluster assembly →	+0.119	+0.057	<.001	<.001	3	3
ESCA	Antigen processing and presentation of endogenous antigen →	+0.150	+0.042	<.001	.004	3	3
ESCA	Antigen processing and presentation of endogenous peptide antigen →	+0.152	+0.040	<.001	.005	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,399 associations by consensus.

Exploration

LINC00489 survival (RNA) · tumor vs normal (RNA) · all LINC00489 data types