LINC00487

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, LINC00487 mutation is significantly associated with the RNA expression of many other genes, with 18 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00487-associated genes across cancer lineages are NUDT4P2, BNIP3P4, and RNA5SP414. Each is linked with LINC00487 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00487-to-partner and partner-to-LINC00487 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00487→partner) and Y-score (partner→LINC00487) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECNUDT4P2 →+0.089+4.484<.001.00931
UCECBNIP3P4 →+0.109+4.484<.001.00931
UCECRNA5SP414 →+1.505+4.840<.001.00331
UCECRNA5SP412 →+1.142+4.552<.001.00531
UCECRNU4-56P →+0.440+5.582<.001.00231
UCECMIR32 →+0.679+4.484<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

Exploration