LINC00484

Across TCGA patient cohorts, LINC00484 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,220 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible LINC00484-associated proteins across cancer lineages are SCLY, ERO1A, and NRF1. Each is linked with LINC00484 in more than 3 cancer types. Because this analysis shows association rather than direction, both LINC00484-to-partner and partner-to-LINC00484 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00484 versus SCLY in CCRCC, with a Pearson correlation of 0.42.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00484→partner) and Y-score (partner→LINC00484) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	SCLY →	+0.364	+0.436	<.001	<.001	3	4
PDAC	ERO1A →	-0.685	-0.318	<.001	<.001	3	4
HNSC	NRF1 →	+0.219	+0.502	<.001	<.001	3	3
HNSC	PGAM1_S31 →	-0.732	-0.593	<.001	<.001	3	3
HNSC	TXNDC17 →	-0.352	-0.610	.005	.009	3	3
HNSC	USF1 →	+0.246	+0.528	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,220 associations by consensus.

LINC00484 vs SCLY — CCRCC

Explore this scatter interactively →