LINC00469

Across TCGA patient cohorts, LINC00469 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,636 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00469-associated GO terms across cancer lineages are Protein polymerization, Lysosomal transport, and Establishment of protein localization to endoplasmic reticulum. Each is linked with LINC00469 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC00469-to-partner and partner-to-LINC00469 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Protein polymerization grouped by LINC00469-low versus LINC00469-high in UCEC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00469→partner) and Y-score (partner→LINC00469) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	Protein polymerization →	+0.031	+0.032	<.001	<.001	3	11
STAD	Lysosomal transport →	+0.087	+0.169	<.001	<.001	3	11
ESCA	Establishment of protein localization to endoplasmic reticulum →	+0.073	+0.111	<.001	.007	2	12
STAD	TOR signaling →	+0.084	+0.157	<.001	<.001	3	11
STAD	Peptidyl-threonine modification →	+0.063	+0.099	<.001	<.001	3	11
STAD	Gland morphogenesis →	+0.068	+0.145	<.001	.002	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,636 associations by consensus.

Protein polymerization by LINC00469 expression — UCEC

Explore this box plot interactively →