LINC00469

Across TCGA patient cohorts, LINC00469 mutation is significantly associated with the RNA expression of many other genes, with 15 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00469-associated genes across cancer lineages are TERF1P2, RNU6-1082P, and SLCO1B7. Each is linked with LINC00469 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00469-to-partner and partner-to-LINC00469 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TERF1P2 grouped by LINC00469-low versus LINC00469-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00469→partner) and Y-score (partner→LINC00469) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	TERF1P2 →	+0.105	+3.815	.005	.009	3	1
UCEC	RNU6-1082P →	+0.570	+5.136	<.001	<.001	3	1
UCEC	SLCO1B7 →	+0.227	+3.927	<.001	.007	3	1
UCEC	RNU6-354P →	+0.459	+4.223	.005	.003	3	1
UCEC	RNU6-767P →	+0.619	+3.871	.002	.006	3	1
UCEC	RNU6-192P →	+0.374	+4.267	.002	.009	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 15 associations by consensus.

TERF1P2 by LINC00469 expression — UCEC

Explore this box plot interactively →