LINC00440

Across TCGA patient cohorts, LINC00440 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,771 significant associations in total. LGG shows the largest number of these associations.

The most reproducible LINC00440-associated GO terms across cancer lineages are Regulation of protein localization to cell periphery, Regulation of muscle contraction, and Neuromuscular process. Each is linked with LINC00440 in more than 7 cancer types. Because this analysis shows association rather than direction, both LINC00440-to-partner and partner-to-LINC00440 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of protein localization to cell periphery grouped by LINC00440-low versus LINC00440-high in KIRP.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00440→partner) and Y-score (partner→LINC00440) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
KIRP	Regulation of protein localization to cell periphery →	+0.036	+0.008	.001	.006	2	8
UCEC	Regulation of muscle contraction →	+0.027	+0.025	<.001	<.001	3	6
LGG	Neuromuscular process →	+0.032	+0.121	<.001	<.001	3	5
UCEC	Cardiac muscle contraction →	+0.027	+0.024	<.001	<.001	3	5
STAD	Regulation of cell growth involved in cardiac muscle cell development →	+0.055	+0.051	<.001	<.001	3	5
LGG	Regulation of synaptic vesicle endocytosis →	+0.052	+0.121	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,771 associations by consensus.

Regulation of protein localization to cell periphery by LINC00440 expression — KIRP

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