LINC00412

Across TCGA patient cohorts, LINC00412 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,295 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC00412-associated proteins across cancer lineages are RBMX_S352, EEF2_S502, and PRPF38B_S529. Each is linked with LINC00412 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00412-to-partner and partner-to-LINC00412 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00412 versus RBMX_S352 in LUAD, with a Pearson correlation of 0.27.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00412→partner) and Y-score (partner→LINC00412) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	RBMX_S352 →	+0.530	+0.411	<.001	.005	3	5
PDAC	EEF2_S502 →	-0.730	-0.491	.001	.001	3	5
CCRCC	PRPF38B_S529 →	+0.616	+0.625	<.001	<.001	3	5
COAD	PDS5B →	+0.364	+0.625	<.001	<.001	3	5
LSCC	PIK3C2A_S259 →	-0.527	-0.693	<.001	<.001	3	4
LSCC	BRPF1_S860 →	+0.431	+0.615	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,295 associations by consensus.

LINC00412 vs RBMX_S352 — LUAD

Explore this scatter interactively →