LINC00395

Across TCGA patient cohorts, LINC00395 RNA expression is significantly associated with the go_rna of many other GO terms, with 4,063 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00395-associated GO terms across cancer lineages are Regulation of double-strand break repair, Protein-DNA complex assembly, and Protein modification by small protein removal. Each is linked with LINC00395 in more than 9 cancer types. Because this analysis shows association rather than direction, both LINC00395-to-partner and partner-to-LINC00395 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of double-strand break repair grouped by LINC00395-low versus LINC00395-high in ESCA.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00395→partner) and Y-score (partner→LINC00395) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
ESCA	Regulation of double-strand break repair →	+0.068	+0.034	<.001	<.001	3	10
ESCA	Protein-DNA complex assembly →	+0.079	+0.050	<.001	<.001	3	10
ESCA	Protein modification by small protein removal →	+0.083	+0.027	<.001	<.001	3	10
ESCA	Regulation of protein serine/threonine kinase activity →	+0.060	+0.025	<.001	.001	3	10
ESCA	Telomere organization →	+0.076	+0.055	<.001	<.001	3	10
ESCA	Regulation of protein ubiquitination →	+0.082	+0.025	<.001	.001	3	10

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,063 associations by consensus.

Regulation of double-strand break repair by LINC00395 expression — ESCA

Explore this box plot interactively →