LINC00347

Across TCGA patient cohorts, LINC00347 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,601 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00347-associated GO terms across cancer lineages are Negative regulation of protein localization, DNA-templated transcription elongation, and Establishment of protein localization to membrane. Each is linked with LINC00347 in more than 11 cancer types. Because this analysis shows association rather than direction, both LINC00347-to-partner and partner-to-LINC00347 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of protein localization grouped by LINC00347-low versus LINC00347-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00347→partner) and Y-score (partner→LINC00347) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Negative regulation of protein localization →	+0.072	+0.066	<.001	<.001	3	12
ESCA	DNA-templated transcription elongation →	+0.094	+0.107	<.001	<.001	3	12
STAD	Establishment of protein localization to membrane →	+0.082	+0.065	<.001	<.001	3	11
STAD	Regulation of DNA binding →	+0.068	+0.068	<.001	<.001	3	11
STAD	Regulation of cell division →	+0.064	+0.059	<.001	<.001	3	11
STAD	Nucleotide-excision repair →	+0.065	+0.066	<.001	<.001	3	11

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,601 associations by consensus.

Negative regulation of protein localization by LINC00347 expression — STAD

Explore this box plot interactively →