LINC00309

Across TCGA patient cohorts, LINC00309 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,400 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00309-associated GO terms across cancer lineages are Response to reactive oxygen species, Establishment of cell polarity, and Positive regulation of DNA biosynthetic process. Each is linked with LINC00309 in more than 12 cancer types. Because this analysis shows association rather than direction, both LINC00309-to-partner and partner-to-LINC00309 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Response to reactive oxygen species grouped by LINC00309-low versus LINC00309-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00309→partner) and Y-score (partner→LINC00309) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Response to reactive oxygen species →	+0.062	+0.065	<.001	<.001	3	13
STAD	Establishment of cell polarity →	+0.059	+0.061	<.001	<.001	3	12
STAD	Positive regulation of DNA biosynthetic process →	+0.066	+0.063	<.001	<.001	3	12
STAD	Protein-containing complex disassembly →	+0.061	+0.063	<.001	<.001	3	12
STAD	Negative regulation of hydrolase activity →	+0.051	+0.071	<.001	<.001	3	12
STAD	Protein folding →	+0.059	+0.060	<.001	<.001	3	12

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,400 associations by consensus.

Response to reactive oxygen species by LINC00309 expression — STAD

Explore this box plot interactively →