LINC00280

Across TCGA patient cohorts, LINC00280 RNA expression is significantly associated with the go_rna of many other GO terms, with 337 significant associations in total. STAD shows the largest number of these associations.

The most reproducible LINC00280-associated GO terms across cancer lineages are Inner ear morphogenesis, CD4-positive, alpha-beta T cell activation, and Co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway. Each is linked with LINC00280 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00280-to-partner and partner-to-LINC00280 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Inner ear morphogenesis grouped by LINC00280-low versus LINC00280-high in LGG.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00280→partner) and Y-score (partner→LINC00280) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LGG	Inner ear morphogenesis →	+0.010	+0.013	.004	.002	3	1
LIHC	CD4-positive, alpha-beta T cell activation →	+0.043	+0.008	.003	.008	3	1
STAD	Co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway →	+0.087	+0.017	<.001	.005	3	1
STAD	Adaptive thermogenesis →	+0.082	+0.008	<.001	.008	3	1
STAD	ER to Golgi ceramide transport →	+0.064	+0.008	.005	.008	3	1
STAD	Cellular response to retinoic acid →	+0.071	+0.017	.002	.008	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 337 associations by consensus.

Inner ear morphogenesis by LINC00280 expression — LGG

Explore this box plot interactively →