LINC00271

Across TCGA patient cohorts, LINC00271 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,047 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible LINC00271-associated proteins across cancer lineages are IFT140, EEF2, and SCAF8. Each is linked with LINC00271 in more than 5 cancer types. Because this analysis shows association rather than direction, both LINC00271-to-partner and partner-to-LINC00271 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, LINC00271 versus IFT140 in BRCA, with a Pearson correlation of 0.52.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00271→partner) and Y-score (partner→LINC00271) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	IFT140 →	+0.460	+0.329	<.001	<.001	3	6
CCRCC	EEF2 →	-0.236	-0.560	<.001	<.001	3	5
BRCA	SCAF8 →	+0.192	+0.275	.001	<.001	3	5
BRCA	COLGALT1 →	-0.334	-0.295	<.001	<.001	3	5
UCEC	DYNC2I1 →	+0.401	+0.613	.001	<.001	3	5
OV	KRR1 →	-0.400	-0.251	.006	.006	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,047 associations by consensus.

LINC00271 vs IFT140 — BRCA

Explore this scatter interactively →