Across TCGA patient cohorts, LINC00240 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,845 significant associations in total. HNSC shows the largest number of these associations.

The most reproducible LINC00240-associated proteins across cancer lineages are BANF1, GNL1, and WRNIP1. Each is linked with LINC00240 in more than 4 cancer types. Because this analysis shows association rather than direction, both LINC00240-to-partner and partner-to-LINC00240 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00240→partner) and Y-score (partner→LINC00240) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	BANF1 →	+0.365	+0.676	<.001	<.001	3	5
OV	GNL1 →	+0.384	+0.608	<.001	.003	3	5
OV	WRNIP1 →	+0.409	+0.580	.008	.001	3	5
OV	GTF2I →	+0.786	+1.036	.001	.002	3	4
UCEC	USP13 →	+0.391	+0.633	.004	.003	3	4
OV	RXRB →	+0.373	+0.704	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,845 associations by consensus.

Exploration

LINC00240 survival (RNA) · tumor vs normal (RNA) · all LINC00240 data types